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Crystal structure of carbonmonoxy horse hemoglobin complexed with L35
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 BATCH 6 293 20% PEG1000, 50mM LiCl, 50mM Mes, 0.5mM L35, pH 6.0, BATCH, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.34 47.35
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 62.337 α = 90 b = 107.442 β = 90 c = 87.016 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PHOTON FACTORY BEAMLINE AR-NW12A 1.000 Photon Factory AR-NW12A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.45 20 87.5 0.057 23.3 3.7 45502
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.45 1.5 56.1 0.158
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.45 19.88 43215 2284 100 0.19159 0.19032 0.1914 0.21552 0.214 RANDOM 18.455
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.32 0.5 0.82
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.164 r_dihedral_angle_4_deg 15.187 r_dihedral_angle_3_deg 13.865 r_dihedral_angle_1_deg 4.506 r_scangle_it 3.169 r_scbond_it 2.005 r_angle_refined_deg 1.25 r_mcangle_it 1.238 r_mcbond_it 0.655 r_nbtor_refined 0.316
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.164 r_dihedral_angle_4_deg 15.187 r_dihedral_angle_3_deg 13.865 r_dihedral_angle_1_deg 4.506 r_scangle_it 3.169 r_scbond_it 2.005 r_angle_refined_deg 1.25 r_mcangle_it 1.238 r_mcbond_it 0.655 r_nbtor_refined 0.316 r_nbd_refined 0.228 r_symmetry_vdw_refined 0.177 r_symmetry_hbond_refined 0.153 r_xyhbond_nbd_refined 0.127 r_chiral_restr 0.078 r_bond_refined_d 0.01 r_gen_planes_refined 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2203 Nucleic Acid Atoms Solvent Atoms 224 Heterogen Atoms 140
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling MOLREP phasing