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Crystal Structure of a beta-catenin/BCL9/Tcf4 complex
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 298 13% PEG 3350, 125mM sodium thiocyanate, 5% Glycerol, 10mM DTT, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Crystal Properties Matthews coefficient Solvent content 2.65 53.63
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 96.764 α = 90 b = 119.441 β = 90 c = 130.549 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2005-09-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.1 1.0000 ALS 5.0.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 50 95.7 57945 55482
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.5 2.59 75.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.6 30 46787 44428 2359 99.12 0.2231 0.22082 0.2175 0.26699 0.2635 RANDOM 23.11
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 6.91 -3.03 -3.88
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 4.663 r_scangle_it 1.895 r_scbond_it 1.042 r_angle_refined_deg 1.035 r_angle_other_deg 0.828 r_mcangle_it 0.716 r_mcbond_it 0.37 r_symmetry_hbond_refined 0.25 r_symmetry_vdw_other 0.201 r_nbd_other 0.195
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 4.663 r_scangle_it 1.895 r_scbond_it 1.042 r_angle_refined_deg 1.035 r_angle_other_deg 0.828 r_mcangle_it 0.716 r_mcbond_it 0.37 r_symmetry_hbond_refined 0.25 r_symmetry_vdw_other 0.201 r_nbd_other 0.195 r_nbd_refined 0.178 r_xyhbond_nbd_refined 0.127 r_symmetry_vdw_refined 0.11 r_nbtor_other 0.084 r_chiral_restr 0.076 r_bond_refined_d 0.009 r_gen_planes_refined 0.003 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8301 Nucleic Acid Atoms Solvent Atoms 128 Heterogen Atoms
Software Software Software Name Purpose ADSC data collection HKL-2000 data reduction AMoRE phasing REFMAC refinement HKL-2000 data scaling