2IHB

Crystal structure of the heterodimeric complex of human RGS10 and activated Gi alpha 3


X-RAY DIFFRACTION

Starting Model(s)

Initial Refinement Model(s)
TypeSourceAccession CodeDetails
experimental modelPDB 1AGRSwissmodel based on the coordinates of PDB entries 1agr, 1ezt, 1ezy, 2bv1
experimental modelPDB 1EZTSwissmodel based on the coordinates of PDB entries 1agr, 1ezt, 1ezy, 2bv1
experimental modelPDB 1EZYSwissmodel based on the coordinates of PDB entries 1agr, 1ezt, 1ezy, 2bv1
experimental modelPDB 2BV1Swissmodel based on the coordinates of PDB entries 1agr, 1ezt, 1ezy, 2bv1

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP5.52930.2M (NH4)2SO4, 0.1M Bis-Tris, pH 5.5, 25% PEG3350 , VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
3.3363.08

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 100.628α = 90
b = 100.628β = 90
c = 145.359γ = 90
Symmetry
Space GroupP 43 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARMOSAIC 225 mm CCD2006-05-06MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X10SA0.97925SLSX10SA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.75097.22081520470
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.72.7580.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-Work (Depositor)R-Work (DCC)R-Free (Depositor)R-Free (DCC)R-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTSwissmodel based on the coordinates of PDB entries 1agr, 1ezt, 1ezy, 2bv12.7147.61943019430104097.420.209130.209130.207630.210.236320.23RANDOM48.111
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
2.072.07-4.13
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.469
r_dihedral_angle_4_deg21.765
r_dihedral_angle_3_deg15.248
r_dihedral_angle_1_deg5.349
r_scangle_it1.47
r_angle_refined_deg1.057
r_scbond_it0.895
r_angle_other_deg0.806
r_mcangle_it0.702
r_mcbond_it0.386
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3399
Nucleic Acid Atoms
Solvent Atoms18
Heterogen Atoms34

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling
PHASERphasing