2JUJ
Solution Structure of the UBA domain from c-Cbl
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 20mM sodium phosphate, 50mM sodium chloride, 1mM DTT, 90% H2O, 10% D2O | 90% H2O/10% D2O | 50 | 6.5 | ambient | 298 | |
2 | 3D HNCACB | 20mM sodium phosphate, 50mM sodium chloride, 1mM DTT, 90% H2O, 10% D2O | 90% H2O/10% D2O | 50 | 6.5 | ambient | 298 | |
3 | 3D CBCA(CO)NH | 20mM sodium phosphate, 50mM sodium chloride, 1mM DTT, 90% H2O, 10% D2O | 90% H2O/10% D2O | 50 | 6.5 | ambient | 298 | |
4 | 3D HNCO | 20mM sodium phosphate, 50mM sodium chloride, 1mM DTT, 90% H2O, 10% D2O | 90% H2O/10% D2O | 50 | 6.5 | ambient | 298 | |
5 | 3D HNHA | 20mM sodium phosphate, 50mM sodium chloride, 1mM DTT, 90% H2O, 10% D2O | 90% H2O/10% D2O | 50 | 6.5 | ambient | 298 | |
6 | 3D HCCH-TOCSY | 20mM sodium phosphate, 50mM sodium chloride, 1mM DTT | 100% D2O | 50 | 6.5 | ambient | 298 | |
7 | 3D 1H-15N NOESY | 20mM sodium phosphate, 50mM sodium chloride, 1mM DTT, 90% H2O, 10% D2O | 90% H2O/10% D2O | 50 | 6.5 | ambient | 298 | |
8 | 3D 1H-13C NOESY | 20mM sodium phosphate, 50mM sodium chloride, 1mM DTT | 100% D2O | 50 | 6.5 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITY | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | The structures were calculated with ARIA/CNS using torsion angle dynamics | CNS |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | 15 structures for lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 15 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | CNS |