2JVL
NMR structure of the C-terminal domain of MBF1 of Trichoderma reesei
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D 1H-13C NOESY | 20 mM sodium phosphate, 100 mM sodium choloride, 5 % D2O | 95% H2O/5% D2O | 0.151 | 6.0 | ambient | 298 | |
2 | 3D 1H-15N NOESY | 20 mM sodium phosphate, 100 mM sodium choloride, 5 % D2O | 95% H2O/5% D2O | 0.151 | 6.0 | ambient | 298 | |
3 | 2D 1H-1H NOESY | 20 mM sodium phosphate, 100 mM sodium choloride, 5 % D2O | 95% H2O/5% D2O | 0.151 | 6.0 | ambient | 298 | |
4 | 3D 1H-13C NOESY | 20 mM sodium phosphate, 100 mM sodium choloride | 100% D2O | 0.151 | 6.0 | ambient | 298 | |
5 | 2D 1H-1H NOESY | 20 mM sodium phosphate, 100 mM sodium choloride | 100% D2O | 0.151 | 6.0 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
2 | Bruker | DRX | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | water refinement with Haddock2.0 using CNS | NMRView |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | data processing | NMRView | 5.2.2 | Johnson, One Moon Scientific |
2 | data analysis | CCPNMR | 1.0.14 | CCPN |
3 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
4 | refinement | HADDOCK | 2.0 | Dominguez, Boelens, Bonvin |