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NMR Structure of the N-terminal Coiled Coil Domain of the Andes Hantavirus Nucleocapsid Protein
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1.0 mM [U-100% 15N] protein, 10 mM sodium phosphate, 10 mM sodium chloride 90% H2O/10% D2O 28 6.9 ambient 298 2 3D HNCA 1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM sodium chloride 90% H2O/10% D2O 28 6.9 ambient 298 3 3D HNCACB 1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM sodium chloride 90% H2O/10% D2O 28 6.9 ambient 298 4 3D HNCO 1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM sodium chloride 90% H2O/10% D2O 28 6.9 ambient 298 5 3D CBCA(CO)NH 1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM sodium chloride 90% H2O/10% D2O 28 6.9 ambient 298 6 3D 1H-15N NOESY 1.0 mM [U-100% 15N] protein, 10 mM sodium phosphate, 10 mM sodium chloride 90% H2O/10% D2O 28 6.9 ambient 298 7 3D HBHA(CO)NH 1.0 mM [U-100% 15N] protein, 10 mM sodium phosphate, 10 mM sodium chloride 90% H2O/10% D2O 28 6.9 ambient 298 8 3D 1H-13C NOESY 1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM sodium phosphate, 10 mM sodium chloride 100% D2O 28 6.9 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800
NMR Refinement Method Details Software simulated annealing, molecular dynamics NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe 2.3 Delaglio, F. et al. 2 data analysis NMRView 5.0.4 Johnson, B. et al. 3 structure solution CYANA 1.0 Guntert, P. et al. 4 refinement CYANA 1.0 Guntert, P. et al. 5 refinement Amber 7 Case, D. et al.