2K7F
HADDOCK calculated model of the complex between the BRCT region of RFC p140 and dsDNA
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 0.3 mM [U-98% 13C; U-98% 15N] BRCT region RFC p140, 0.3 mM DNA strand, 0.3 mM DNA strand primer | 95% H2O/5% D2O | 5 | 7.5 | ambient | 298 | |
2 | f1 isotope filtered 2D NOESY | 0.3 mM [U-98% 13C; U-98% 15N] BRCT region RFC p140, 0.3 mM DNA strand, 0.3 mM DNA strand primer | 95% H2O/5% D2O | 5 | 7.5 | ambient | 298 | |
3 | f1,f2 isotope filtered 2D NOESY | 0.3 mM [U-98% 13C; U-98% 15N] BRCT region RFC p140, 0.3 mM DNA strand, 0.3 mM DNA strand primer | 95% H2O/5% D2O | 5 | 7.5 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DMX | 900 |
NMR Refinement | ||
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Method | Details | Software |
HADDOCK | The refinement method can be found in Dominguez C., Boelens R and Bonvin AMJJ., JACS 125, 1731 (2003) | HADDOCK |
NMR Ensemble Information | |
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Conformer Selection Criteria | back calculated data agree with experimental NOESY spectrum |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 4 |
Representative Model | 1 (fewest violations) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | HADDOCK | 2.0 | Dominguez C., Boelens R and Bonvin AMJJ., JACS 125, 1731 (2003) |
2 | refinement | HADDOCK | 2.0 | Dominguez C., Boelens R and Bonvin AMJJ., JACS 125, 1731 (2003) |