2KBK
Solution Structure of BmK-M10
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H TOCSY | 1.9 mM BmK-M10 | 90% H2O/10% D2O | 20 | 4.34 | ambient | 298 | |
2 | 2D DQF-COSY | 1.9 mM BmK-M10 | 90% H2O/10% D2O | 20 | 4.34 | ambient | 298 | |
3 | 2D 1H-1H NOESY | 1.9 mM BmK-M10 | 90% H2O/10% D2O | 20 | 4.34 | ambient | 298 | |
4 | 2D 1H-1H TOCSY | 1.9 mM BmK-M10 | 90% H2O/10% D2O | 20 | 5.52 | ambient | 298 | |
5 | 2D DQF-COSY | 1.9 mM BmK-M10 | 90% H2O/10% D2O | 20 | 5.52 | ambient | 298 | |
6 | 2D 1H-1H NOESY | 1.9 mM BmK-M10 | 90% H2O/10% D2O | 20 | 5.52 | ambient | 298 | |
7 | 2D 1H-1H TOCSY | 1.9 mM BmK-M10 | 100% D2O | 20 | 4.34 | ambient | 298 | |
8 | 2D DQF-COSY | 1.9 mM BmK-M10 | 100% D2O | 20 | 4.34 | ambient | 298 | |
9 | 2D 1H-1H NOESY | 1.9 mM BmK-M10 | 100% D2O | 20 | 4.34 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing, torsion angle dynamics | VNMR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (fewest violations) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | VNMR | Varian | |
2 | data analysis | VNMR | Varian | |
3 | processing | VNMR | Varian | |
4 | chemical shift assignment | CARA | Keller and Wuthrich | |
5 | peak picking | CARA | Keller and Wuthrich | |
6 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
7 | structure solution | ProcheckNMR | Laskowski and MacArthur | |
8 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich | |
9 | refinement | ProcheckNMR | Laskowski and MacArthur | |
10 | data analysis | NMRDraw | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
11 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
12 | data analysis | MOLMOL | Koradi, Billeter and Wuthrich |