2M0Q
Solution NMR analysis of intact KCNE2 in detergent micelles demonstrate a straight transmembrane helix
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 1.0 mM [U-15N] KCNE2 | 90% H2O/10% D2O | 50 | 6.0 | ambient | 308 | |
2 | 2D 1H-15N HSQC | 1.0 mM [U-13C; U-15N] KCNE2 | 90% H2O/10% D2O | 50 | 6.0 | ambient | 308 | |
3 | 2D 1H-15N HSQC | 1.0 mM [U-13C; U-15N; U-2H] KCNE2 | 90% H2O/10% D2O | 50 | 6.0 | ambient | 308 | |
4 | 3D HNCO | 1.0 mM [U-13C; U-15N; U-2H] KCNE2 | 90% H2O/10% D2O | 50 | 6.0 | ambient | 308 | |
5 | 3D HNCA | 1.0 mM [U-13C; U-15N; U-2H] KCNE2 | 90% H2O/10% D2O | 50 | 6.0 | ambient | 308 | |
6 | 3D HN(CO)CA | 1.0 mM [U-13C; U-15N; U-2H] KCNE2 | 90% H2O/10% D2O | 50 | 6.0 | ambient | 308 | |
7 | 3D HNCACB | 1.0 mM [U-13C; U-15N; U-2H] KCNE2 | 90% H2O/10% D2O | 50 | 6.0 | ambient | 308 | |
8 | 3D HN(COCA)CB | 1.0 mM [U-13C; U-15N; U-2H] KCNE2 | 90% H2O/10% D2O | 50 | 6.0 | ambient | 308 | |
9 | 3D HBHA(CO)NH | 1.0 mM [U-13C; U-15N] KCNE2 | 90% H2O/10% D2O | 50 | 6.0 | ambient | 308 | |
10 | 3D 1H-15N NOESY | 1.0 mM [U-15N] KCNE2 | 90% H2O/10% D2O | 50 | 6.0 | ambient | 308 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DMX | 600 |
2 | Bruker | DMX | 800 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | NMRPipe |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | data analysis | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
2 | chemical shift assignment | NMRView | Johnson, One Moon Scientific | |
3 | structure solution | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
4 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore |