2M2T
ASFV Pol X structure
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 1.0 mM [U-100% 13C; U-100% 15N; U-80% 2H] protein, 10 mM [U-2H] DTT, 50 mM potassium chloride, 50 mM borate | 90% H2O/10% D2O | 100 | 6.5 | ambient | 293 | |
2 | 2D 1H-13C HSQC | 1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM [U-2H] DTT, 50 mM potassium chloride, 50 mM borate | 90% H2O/10% D2O | 100 | 6.5 | ambient | 293 | |
3 | 3D HNCO | 1.0 mM [U-100% 13C; U-100% 15N; U-80% 2H] protein, 10 mM [U-2H] DTT, 50 mM potassium chloride, 50 mM borate | 90% H2O/10% D2O | 100 | 6.5 | ambient | 293 | |
4 | 3D HNCA | 1.0 mM [U-100% 13C; U-100% 15N; U-80% 2H] protein, 10 mM [U-2H] DTT, 50 mM potassium chloride, 50 mM borate | 90% H2O/10% D2O | 100 | 6.5 | ambient | 293 | |
5 | 3D HNCACB | 1.0 mM [U-100% 13C; U-100% 15N; U-80% 2H] protein, 10 mM [U-2H] DTT, 50 mM potassium chloride, 50 mM borate | 90% H2O/10% D2O | 100 | 6.5 | ambient | 293 | |
6 | 3D 1H-15N NOESY | 1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM [U-2H] DTT, 50 mM potassium chloride, 50 mM borate | 90% H2O/10% D2O | 100 | 6.5 | ambient | 293 | |
7 | 3D 1H-13C NOESY | 1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM [U-2H] DTT, 50 mM potassium chloride, 50 mM borate | 90% H2O/10% D2O | 100 | 6.5 | ambient | 293 | |
8 | 3D HCCH-TOCSY | 1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM [U-2H] DTT, 50 mM potassium chloride, 50 mM borate | 90% H2O/10% D2O | 100 | 6.5 | ambient | 293 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
2 | Bruker | AVANCE | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | HADDOCK |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 2000 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | HADDOCK | Dr. Alexandre Bonvin | |
2 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich |