2MHS
NMR Structure of human Mcl-1
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D 15N/13Caliphatic/13Caromatic-resolved NOESY | 0.7 mM [U-100% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 | |
2 | GFT(4,3)D HNNCabCa | 0.7 mM [U-100% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 | |
3 | GFT(4,3)DCabCacoNHN | 0.7 mM [U-100% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 | |
4 | GFT(4,3)D HabCabcoNHN | 0.7 mM [U-100% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 | |
5 | GFT(4,3)D HNNCO | 0.7 mM [U-100% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 | |
6 | GFT (4,3)D HCCH | 0.7 mM [U-100% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 | |
7 | 2D 1H-13C HSQC | 0.7 mM [U-5% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 | |
8 | 2D 1H-15N HSQC | 0.7 mM [U-100% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 | |
9 | 2D 1H-13C HSQC | 0.7 mM [U-100% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 | |
10 | 2D 1H-13C HSQC aromatic | 0.7 mM [U-100% 13C; U-100% 15N] mcl-1 | 95% H2O/5% D2O | 0.3 | 7.4 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 750 |
2 | Varian | INOVA | 600 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry, molecular dynamics, simulated annealing, torsion angle dynamics | VNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | VNMR | Varian | |
2 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
3 | data analysis | XEASY | Bartels et al. | |
4 | chemical shift assignment | AutoAssign | Zimmerman, Moseley, Kulikowski and Montelione | |
5 | structure solution | AutoStructure | Huang, Tejero, Powers and Montelione | |
6 | data analysis | AutoStructure | Huang, Tejero, Powers and Montelione | |
7 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
8 | data analysis | CYANA | Guntert, Mumenthaler and Wuthrich | |
9 | structure solution | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
10 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
11 | processing | SPSCAN | Glaser | |
12 | data analysis | PSVS | Bhattacharya and Montelione |