Backbone and side chain 1H, 13C, and 15N Chemical Shift Assignments for EDB and specific binding aptide
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D HNCACB | 0.3 mM [U-100% 13C; U-100% 15N] EDB and APT-1 | 90% H2O/10% D2O | 20 | 6 | ambient | 298 | |
| 2 | 3D CBCA(CO)NH | 0.3 mM [U-100% 13C; U-100% 15N] EDB and APT-1 | 90% H2O/10% D2O | 20 | 6 | ambient | 298 | |
| 3 | 3D HCCH-TOCSY | 0.3 mM [U-100% 13C; U-100% 15N] EDB and APT-1 | 90% H2O/10% D2O | 20 | 6 | ambient | 298 | |
| 4 | 3D 1H-13C NOESY | 0.3 mM [U-100% 13C; U-100% 15N] EDB and APT-1 | 90% H2O/10% D2O | 20 | 6 | ambient | 298 | |
| 5 | 3D 1H-15N NOESY | 0.3 mM [U-100% 13C; U-100% 15N] EDB and APT-1 | 90% H2O/10% D2O | 20 | 6 | ambient | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 900 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | X-PLOR NIH | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the least restraint violations |
| Conformers Calculated Total Number | 50 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (fewest violations) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | chemical shift assignment | X-PLOR NIH | Garrett | |
| 2 | refinement | X-PLOR NIH | Garrett | |
| 3 | chemical shift assignment | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
| 4 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
