2MS7
High-resolution solid-state NMR structure of the helical signal transduction filament MAVS CARD
SOLID-STATE NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D DARR | 20 mM [U-99% 13C; U-99% 15N] MAVS CARD-1 | H2O | 0 | 7 | ambient | 278 | |
2 | 3D NCACX | 20 mM [U-99% 13C; U-99% 15N] MAVS CARD-1 | H2O | 0 | 7 | ambient | 278 | |
3 | 3D NCOCX | 20 mM [U-99% 13C; U-99% 15N] MAVS CARD-1 | H2O | 0 | 7 | ambient | 278 | |
4 | 3D CANCO | 20 mM [U-99% 13C; U-99% 15N] MAVS CARD-1 | H2O | 0 | 7 | ambient | 278 | |
5 | 2D PDSD | 20 mM [U-99% 13C; U-99% 15N] MAVS CARD-1 | H2O | 0 | 7 | ambient | 278 | |
6 | 2D PAIN | 20 mM [U-99% 13C; U-99% 15N] MAVS CARD-1 | H2O | 0 | 7 | ambient | 278 | |
7 | 2D NCA | 20 mM [U-99% 13C; U-99% 15N] MAVS CARD-1 | H2O | 0 | 7 | ambient | 278 | |
8 | 2D NCX | 20 mM U15N mixed with U13C labeled sample MAVS CARD-6 | H2O | 0 | 7 | ambient | 278 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | Simulated annealing with helical symmetry constrained by strict NCS. | CcpNmr |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 500 |
Conformers Submitted Total Number | 15 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | data analysis | CcpNmr | CCPN | |
2 | chemical shift assignment | CcpNmr | CCPN | |
3 | structure solution | ARIA | 2.3.2 | Linge, O'Donoghue and Nilges |
4 | data analysis | ARIA | 2.3.2 | Linge, O'Donoghue and Nilges |
5 | structure solution | CNS | 1.2 | Brunger, Adams, Clore, Gros, Nilges and Read |
6 | geometry optimization | CNS | 1.2 | Brunger, Adams, Clore, Gros, Nilges and Read |
7 | data analysis | TALOS | Cornilescu, Delaglio and Bax | |
8 | collection | TopSpin | Bruker Biospin | |
9 | processing | TopSpin | Bruker Biospin | |
10 | refinement | ARIA/CNS |