2VZP

Atomic Resolution Structure of the C-terminal CBM35 from Amycolatopsis orientalis exo-chitosanase CsxA


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
1.8449.55

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 54.573α = 90
b = 57.022β = 90
c = 81.699γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray113CCDADSC CCDMSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X8CNSLSX8C

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.051598.90.0813.36.21178962
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.051.11980.463.25

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUTNONE1.0581.65111888589498.70.1290.1270.149RANDOM6.14
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.010.31-0.3
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.183
r_dihedral_angle_4_deg11.905
r_dihedral_angle_3_deg10.858
r_dihedral_angle_1_deg6.885
r_scangle_it4.088
r_scbond_it3.212
r_mcangle_it2.733
r_angle_refined_deg1.93
r_mcbond_it1.904
r_angle_other_deg1.142
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.183
r_dihedral_angle_4_deg11.905
r_dihedral_angle_3_deg10.858
r_dihedral_angle_1_deg6.885
r_scangle_it4.088
r_scbond_it3.212
r_mcangle_it2.733
r_angle_refined_deg1.93
r_mcbond_it1.904
r_angle_other_deg1.142
r_nbd_refined0.279
r_symmetry_vdw_other0.274
r_symmetry_hbond_refined0.255
r_nbd_other0.241
r_xyhbond_nbd_refined0.203
r_chiral_restr0.192
r_nbtor_refined0.179
r_symmetry_vdw_refined0.113
r_nbtor_other0.097
r_bond_refined_d0.018
r_gen_planes_refined0.011
r_gen_planes_other0.004
r_bond_other_d0.002
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1834
Nucleic Acid Atoms
Solvent Atoms484
Heterogen Atoms20

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
CCP4data scaling