X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
172.1 M MALIC ACID PH 7.0
Crystal Properties
Matthews coefficientSolvent content
2.7354.59

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 54.09α = 90
b = 71.637β = 90.04
c = 54.132γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray273CCDADSC CCDSI2007-06-20MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 17-BMAPS17-BM

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.45099.90.1133.717017
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.42.4999.90.492.53.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.3571.611613686197.70.1790.1750.246RANDOM25.2
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.680.11-1.230.55
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.818
r_dihedral_angle_4_deg24.736
r_dihedral_angle_3_deg18.775
r_dihedral_angle_1_deg10.173
r_scangle_it8.665
r_scbond_it6.522
r_mcangle_it4.065
r_mcbond_it2.833
r_angle_refined_deg2.4
r_symmetry_vdw_refined0.354
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.818
r_dihedral_angle_4_deg24.736
r_dihedral_angle_3_deg18.775
r_dihedral_angle_1_deg10.173
r_scangle_it8.665
r_scbond_it6.522
r_mcangle_it4.065
r_mcbond_it2.833
r_angle_refined_deg2.4
r_symmetry_vdw_refined0.354
r_nbtor_refined0.322
r_nbd_refined0.264
r_chiral_restr0.206
r_xyhbond_nbd_refined0.2
r_symmetry_hbond_refined0.157
r_bond_refined_d0.025
r_gen_planes_refined0.009
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2570
Nucleic Acid Atoms
Solvent Atoms136
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling
AMoREphasing