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Thermotoga maritima maltotriose binding protein bound with maltotriose
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 5.5 290 0.2M Magnesium Chloride Hexahydrate, 0.1M pH5.5 Bis-Tris, 25% w/v PEG 3350, VAPOR DIFFUSION, temperature 290K
Crystal Properties Matthews coefficient Solvent content 2.07 40.46
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 34.728 α = 96.89 b = 55.51 β = 93.08 c = 93.556 γ = 102.05
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 2004-12-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.97934 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.48 50 86.8 0.067 7.8 3.2 97803
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.48 1.53 81.4 81.4 0.874 1.4 3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.6 50 116300 78129 3929 87.53 0.164 0.164 0.162 0.1741 0.196 0.208 RANDOM 15.506
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.79 0.22 0.3 -0.56 -0.04 -0.12
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.672 r_dihedral_angle_4_deg 18.456 r_dihedral_angle_3_deg 11.679 r_dihedral_angle_1_deg 5.663 r_scangle_it 3.046 r_scbond_it 2.159 r_angle_refined_deg 1.332 r_mcangle_it 1.103 r_mcbond_it 1.012 r_angle_other_deg 0.791
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.672 r_dihedral_angle_4_deg 18.456 r_dihedral_angle_3_deg 11.679 r_dihedral_angle_1_deg 5.663 r_scangle_it 3.046 r_scbond_it 2.159 r_angle_refined_deg 1.332 r_mcangle_it 1.103 r_mcbond_it 1.012 r_angle_other_deg 0.791 r_nbd_refined 0.222 r_mcbond_other 0.193 r_nbtor_refined 0.184 r_symmetry_hbond_refined 0.18 r_nbd_other 0.172 r_symmetry_vdw_other 0.139 r_xyhbond_nbd_refined 0.13 r_nbtor_other 0.083 r_symmetry_vdw_refined 0.077 r_chiral_restr 0.076 r_bond_refined_d 0.011 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5803 Nucleic Acid Atoms Solvent Atoms 707 Heterogen Atoms 68
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction MAR345 data collection AMoRE phasing