2RM0
FBP28WW2 domain in complex with a PPPLIPPPP peptide
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 1 mM [U-100% 15N] FPB28WW2, 3 mM PPPLIPPPP, 50 mM sodium phosphate, 100 mM sodium chloride | 90% H2O/10% D2O | 150 | 5.8 | ambient | 285 | |
2 | 3D 1H-15N NOESY | 1 mM [U-100% 15N] FPB28WW2, 3 mM PPPLIPPPP, 50 mM sodium phosphate, 100 mM sodium chloride | 90% H2O/10% D2O | 150 | 5.8 | ambient | 285 | |
3 | 2D 1H-1H NOESY | 1 mM FPB28WW2, 3 mM PPPLIPPPP, 50 mM sodium phosphate, 100 mM sodium chloride | 90% H2O/10% D2O | 150 | 5.8 | ambient | 285 | |
4 | 2D 1H-1H TOCSY | 1 mM FPB28WW2, 3 mM PPPLIPPPP, 50 mM sodium phosphate, 100 mM sodium chloride | 90% H2O/10% D2O | 150 | 5.8 | ambient | 285 | |
5 | 2D 1H-1H NOESY | 1 mM FPB28WW2, 3 mM PPPLIPPPP, 50 mM sodium phosphate, 100 mM sodium chloride | 100% D2O | 150 | 5.8 | ambient | 285 | |
6 | 2D 1H-1H NOESY | 1 mM FPB28WW2, 3 mM PPPLIPPPP, 50 mM sodium phosphate, 100 mM sodium chloride | 100% D2O | 150 | 5.8 | ambient | 285 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 600 |
2 | Bruker | DRX | 800 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing, molecular dynamics | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 60 |
Conformers Submitted Total Number | 8 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | Bruker Biospin | |
2 | chemical shift assignment | XEASY | Keller and Wuthrich | |
3 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
4 | structure validation | ProcheckNMR | Laskowski and MacArthur | |
5 | structure solution | ARIA | Linge, O'Donoghue and Nilges | |
6 | structure display | MOLMOL | Koradi, Billeter and Wuthrich | |
7 | refinement | ARIA | Linge, O'Donoghue and Nilges |