X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP5.52890.1M Bis-tris pH 5.5, 0.2M NH4(OAC), 25% PEG 3350, VAPOR DIFFUSION, SITTING DROP, temperature 289K
Crystal Properties
Matthews coefficientSolvent content
3.2562.2

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 93.623α = 68.2
b = 93.6β = 67.87
c = 93.628γ = 68.14
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315Mirrors2006-12-04MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-ID0.9794, 0.9796APS19-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.783.62970.08420.335274501266266218.8
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.71.74592.080.6051.5421313

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT1.746.1326626626626614230970.180660.180660.178880.21411RANDOM18.647
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.05-0.15-0.210.16-0.240.34
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.581
r_dihedral_angle_4_deg18.549
r_dihedral_angle_3_deg11.48
r_dihedral_angle_1_deg6.666
r_scangle_it5.446
r_scbond_it4.104
r_mcangle_it2.027
r_mcbond_it1.633
r_angle_refined_deg1.447
r_angle_other_deg0.925
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.581
r_dihedral_angle_4_deg18.549
r_dihedral_angle_3_deg11.48
r_dihedral_angle_1_deg6.666
r_scangle_it5.446
r_scbond_it4.104
r_mcangle_it2.027
r_mcbond_it1.633
r_angle_refined_deg1.447
r_angle_other_deg0.925
r_mcbond_other0.838
r_symmetry_vdw_refined0.269
r_nbd_refined0.215
r_nbd_other0.195
r_nbtor_refined0.169
r_xyhbond_nbd_refined0.169
r_symmetry_vdw_other0.159
r_symmetry_hbond_refined0.115
r_chiral_restr0.086
r_nbtor_other0.086
r_bond_refined_d0.016
r_gen_planes_refined0.005
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms14016
Nucleic Acid Atoms
Solvent Atoms1074
Heterogen Atoms144

Software

Software
Software NamePurpose
REFMACrefinement
SBC-Collectdata collection
HKL-2000data reduction
HKL-2000data scaling
HKL-3000phasing