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Crystal Structure of P450BioI in complex with octadec-9Z-enoic acid ligated Acyl Carrier Protein
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 277 0.1 M Na HEPES, 0.25 M NaCl, 0.15 M Li2SO4, 19% PEG 4000, 0.2% n-heptyl b-D-thioglucopyranoside, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.53 51.41
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 61.2 α = 109.3 b = 92 β = 90.8 c = 108 γ = 90.1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2008-03-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA 0.98089 SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 50 97 0.074 13.51 3.9 129867 125956 29.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.1 2.15 95.1 0.366 4.7 3.9 8703
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 2.1 19.95 129867 120465 6295 97.8 0.24215 0.24048 0.27431 0.2858 RANDOM 33.179
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.33 -0.13 -0.68 0.37 2.18 1.38
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.998 r_dihedral_angle_3_deg 15.126 r_dihedral_angle_4_deg 14.906 r_dihedral_angle_1_deg 7.06 r_scangle_it 0.991 r_mcangle_it 0.786 r_angle_refined_deg 0.64 r_scbond_it 0.623 r_mcbond_it 0.444 r_nbtor_refined 0.302
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.998 r_dihedral_angle_3_deg 15.126 r_dihedral_angle_4_deg 14.906 r_dihedral_angle_1_deg 7.06 r_scangle_it 0.991 r_mcangle_it 0.786 r_angle_refined_deg 0.64 r_scbond_it 0.623 r_mcbond_it 0.444 r_nbtor_refined 0.302 r_nbd_refined 0.185 r_symmetry_hbond_refined 0.177 r_symmetry_vdw_refined 0.169 r_xyhbond_nbd_refined 0.127 r_chiral_restr 0.052 r_bond_refined_d 0.004 r_gen_planes_refined 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 14612 Nucleic Acid Atoms Solvent Atoms 806 Heterogen Atoms 395
Software Software Software Name Purpose XDS data scaling Coot model building REFMAC refinement XDS data reduction XSCALE data scaling