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Crystal Structure of the Complex of the E. coli Hfq with Poly(A)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 9.5 298 40% MPD, 0.1 M CHES 9.5, hanging drop, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.24 45.01
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 66.534 α = 90 b = 88.96 β = 90 c = 39.635 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2008-01-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 1.02 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 89.087 99.9 0.051 0.051 8.142 6.8 9714
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.4 2.53 99.8 0.446 0.446 1.7 7.1 1385
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.4 44.5 9680 467 99.77 0.225 0.223 0.221 0.259 RANDOM 61.557
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -4.32 0.33 3.99
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.865 r_dihedral_angle_3_deg 17.312 r_dihedral_angle_4_deg 11.845 r_dihedral_angle_1_deg 7.247 r_mcangle_it 4.187 r_scangle_it 3.495 r_mcbond_it 2.503 r_scbond_it 2.229 r_angle_refined_deg 1.223 r_nbtor_refined 0.308
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.865 r_dihedral_angle_3_deg 17.312 r_dihedral_angle_4_deg 11.845 r_dihedral_angle_1_deg 7.247 r_mcangle_it 4.187 r_scangle_it 3.495 r_mcbond_it 2.503 r_scbond_it 2.229 r_angle_refined_deg 1.223 r_nbtor_refined 0.308 r_symmetry_vdw_refined 0.226 r_symmetry_hbond_refined 0.221 r_nbd_refined 0.204 r_xyhbond_nbd_refined 0.124 r_chiral_restr 0.074 r_bond_refined_d 0.01 r_gen_planes_refined 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1519 Nucleic Acid Atoms 199 Solvent Atoms 9 Heterogen Atoms 39
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling MOLREP phasing REFMAC refinement PDB_EXTRACT data extraction