☰ Navigation Tabs
Complex of FimC, FimF, FimG and FimH
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1KLF PDB entries 1KLF, 3BWU and 3BFQ experimental model PDB 3BWU PDB entries 1KLF, 3BWU and 3BFQ experimental model PDB 3BFQ PDB entries 1KLF, 3BWU and 3BFQ
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 4.1 293 1.6 M potassium chloride, 0.1 M sodium citrate, pH 4.1, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 6.03 79.62
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 216.025 α = 90 b = 216.025 β = 90 c = 532.072 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2008-04-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.2 1.0 ALS 5.0.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.69 176.8 90.6 0.147 0.147 14 9.5 119926
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.69 2.79 46.7 0.862 4.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB entries 1KLF, 3BWU and 3BFQ 2.69 48.34 113836 6018 90.49 0.24506 0.24364 0.2437 0.27208 0.2712 RANDOM 51.028
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.46 0.73 1.46 -2.18
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.928 r_dihedral_angle_3_deg 14.372 r_dihedral_angle_4_deg 14.231 r_dihedral_angle_1_deg 5.436 r_angle_refined_deg 0.905 r_scangle_it 0.886 r_angle_other_deg 0.744 r_mcangle_it 0.658 r_scbond_it 0.507 r_mcbond_it 0.357
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.928 r_dihedral_angle_3_deg 14.372 r_dihedral_angle_4_deg 14.231 r_dihedral_angle_1_deg 5.436 r_angle_refined_deg 0.905 r_scangle_it 0.886 r_angle_other_deg 0.744 r_mcangle_it 0.658 r_scbond_it 0.507 r_mcbond_it 0.357 r_chiral_restr 0.053 r_mcbond_other 0.028 r_bond_refined_d 0.006 r_gen_planes_refined 0.003 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 13822 Nucleic Acid Atoms Solvent Atoms 28 Heterogen Atoms 12
Software Software Software Name Purpose PHASER phasing MOLREP phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling