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Structure of the 14-3-3/PMA2 complex stabilized by Epibestatin
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1YZ5
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 9 277.15 0.1M CHES, 1.0M Na-Citrat, 30%(w/v) sucrose, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 277.15K
Crystal Properties Matthews coefficient Solvent content 4.2 70.72
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 97.62 α = 90 b = 97.62 β = 90 c = 217.03 γ = 90
Symmetry Space Group I 41 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2009-04-04 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA 1.00749 SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.6 44.51 99.8 0.063 19.96 16571 -3 65.561
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.6 2.8 99.9 0.544 3.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1YZ5 2.6 44.51 16569 829 100 0.259 0.255 0.2478 0.324 0.3025 RANDOM 57.455
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.03 0.03 -0.06
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.5 r_dihedral_angle_3_deg 23.686 r_dihedral_angle_4_deg 21.834 r_dihedral_angle_1_deg 6.372 r_scangle_it 4.42 r_mcangle_it 3.617 r_scbond_it 2.791 r_mcbond_it 2.489 r_angle_refined_deg 2.125 r_chiral_restr 0.134
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.5 r_dihedral_angle_3_deg 23.686 r_dihedral_angle_4_deg 21.834 r_dihedral_angle_1_deg 6.372 r_scangle_it 4.42 r_mcangle_it 3.617 r_scbond_it 2.791 r_mcbond_it 2.489 r_angle_refined_deg 2.125 r_chiral_restr 0.134 r_bond_refined_d 0.02 r_gen_planes_refined 0.008
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1991 Nucleic Acid Atoms Solvent Atoms 100 Heterogen Atoms 22
Software Software Software Name Purpose XSCALE data scaling PHASER phasing REFMAC refinement PDB_EXTRACT data extraction XDS data scaling