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Crystal structure of phenazine resistance protein EhpR from Enterobacter agglomerans (Erwinia herbicola, Pantoea agglomerans) Eh1087, apo form
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.6 292 0.1 M Na-citrate, 0.2 M ammonium acetate, 27-30% (w/v) PEG 4000, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 292K
Crystal Properties Matthews coefficient Solvent content 2.12 41.99
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 72.56 α = 90 b = 79.34 β = 90 c = 87.94 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm 2004-02-19 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-3 0.934 ESRF ID14-3
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.15 20 98.1 0.05 23 6.8 27704 27704 -3 -3 49
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.15 2.25 92.5 35.9 5.1 5 3241
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.15 19.84 26266 1438 98.23 0.20814 0.20541 0.2199 0.25876 0.2712 RANDOM 72.563
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.86 -0.98 1.84
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.177 r_dihedral_angle_4_deg 19.22 r_dihedral_angle_3_deg 15.765 r_dihedral_angle_1_deg 6.605 r_scangle_it 3.79 r_scbond_it 2.486 r_angle_refined_deg 1.733 r_mcangle_it 1.628 r_angle_other_deg 1.001 r_mcbond_it 0.945
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.177 r_dihedral_angle_4_deg 19.22 r_dihedral_angle_3_deg 15.765 r_dihedral_angle_1_deg 6.605 r_scangle_it 3.79 r_scbond_it 2.486 r_angle_refined_deg 1.733 r_mcangle_it 1.628 r_angle_other_deg 1.001 r_mcbond_it 0.945 r_mcbond_other 0.235 r_chiral_restr 0.108 r_bond_refined_d 0.02 r_gen_planes_refined 0.009 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3912 Nucleic Acid Atoms Solvent Atoms 66 Heterogen Atoms
Software Software Software Name Purpose XDS data scaling SHARP phasing REFMAC refinement XDS data reduction XSCALE data scaling