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Human caspase 9 in complex with bacterial effector protein
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 293 0.75 K-Na-Tartrate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 4.16 70.44
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 100.703 α = 90 b = 209.906 β = 90 c = 317.231 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M 2010-12-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA 1.0015 SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.49 174.08 98.8 0.126 5.9 3.3 86121 86121
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.49 3.77 98.3 0.581 1.3 3.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT 3.494 174.08 84730 83041 1689 98.4 0.248 0.23963 0.23923 0.2357 0.25949 0.2538 RANDOM 67.695
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 3.83 -2.09 -1.75
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.997 r_dihedral_angle_4_deg 12.032 r_dihedral_angle_3_deg 11.477 r_dihedral_angle_1_deg 5.195 r_scangle_it 1.848 r_mcangle_it 1.402 r_scbond_it 1.029 r_angle_refined_deg 0.932 r_angle_other_deg 0.931 r_mcbond_it 0.745
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.997 r_dihedral_angle_4_deg 12.032 r_dihedral_angle_3_deg 11.477 r_dihedral_angle_1_deg 5.195 r_scangle_it 1.848 r_mcangle_it 1.402 r_scbond_it 1.029 r_angle_refined_deg 0.932 r_angle_other_deg 0.931 r_mcbond_it 0.745 r_mcbond_other 0.059 r_chiral_restr 0.052 r_bond_refined_d 0.008 r_gen_planes_refined 0.003 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 25428 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose MOLREP phasing REFMAC refinement XDS data reduction SCALA data scaling