☰ Navigation Tabs
Crystal structure of horse heart myoglobin reconstituted with cobalt(I) tetradehydrocorrin
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.4 298 0.1M Tris-HCl, 3.4M ammonium sulfate, 10% treharose, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 1.8 31.56
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 34.836 α = 90 b = 28.72 β = 105.6 c = 63.352 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX225HE 2012-04-22 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL44XU 0.90000 SPring-8 BL44XU
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.35 50 95.2 0.037 28.9 2.7 25415
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.35 1.4 92.2 0.221 4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.35 15 24026 1279 94.99 0.14575 0.14292 0.1434 0.1966 0.2004 RANDOM 17.34
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.03 -0.17 -0.55 -0.57
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.48 r_dihedral_angle_3_deg 15.018 r_dihedral_angle_4_deg 10.346 r_scangle_it 7.909 r_scbond_it 5.943 r_dihedral_angle_1_deg 5.222 r_mcangle_it 4.053 r_rigid_bond_restr 3.237 r_angle_refined_deg 3 r_mcbond_it 2.824
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.48 r_dihedral_angle_3_deg 15.018 r_dihedral_angle_4_deg 10.346 r_scangle_it 7.909 r_scbond_it 5.943 r_dihedral_angle_1_deg 5.222 r_mcangle_it 4.053 r_rigid_bond_restr 3.237 r_angle_refined_deg 3 r_mcbond_it 2.824 r_chiral_restr 0.172 r_bond_refined_d 0.026 r_gen_planes_refined 0.016 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1194 Nucleic Acid Atoms Solvent Atoms 130 Heterogen Atoms 94
Software Software Software Name Purpose BSS data collection MOLREP phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling