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Crystal structure of C5b6
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3CU7 PDB ENTRIES 3CU7, 3OJY, 2OK5 experimental model PDB 3OJY PDB ENTRIES 3CU7, 3OJY, 2OK5 experimental model PDB 2OK5 PDB ENTRIES 3CU7, 3OJY, 2OK5
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.8 167 MM HEPES-NAOH PH7.8
Crystal Properties Matthews coefficient Solvent content 4.25 71
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 154.217 α = 90 b = 230.747 β = 90 c = 269.983 γ = 90
Symmetry Space Group I 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.5 50 95.8 0.12 8.4 3.1 59023 2 98.41
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.9 4 97.1 0.81 1.7 2.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRIES 3CU7, 3OJY, 2OK5 3.5 46.19 59017 1214 0.2558 0.2555 0.2951 0.2697 0.3071 RANDOM 157.24
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -8.837 0.1298 8.7072
RMS Deviations Key Refinement Restraint Deviation t_other_torsion 18.1 t_omega_torsion 3.7 t_angle_deg 1.04 t_bond_d 0.007 t_dihedral_angle_d t_incorr_chiral_ct t_pseud_angle t_trig_c_planes t_gen_planes t_it
RMS Deviations Key Refinement Restraint Deviation t_other_torsion 18.1 t_omega_torsion 3.7 t_angle_deg 1.04 t_bond_d 0.007 t_dihedral_angle_d t_incorr_chiral_ct t_pseud_angle t_trig_c_planes t_gen_planes t_it t_nbd t_improper_torsion t_chiral_improper_torsion t_sum_occupancies t_utility_distance t_utility_angle t_utility_torsion t_ideal_dist_contact
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 18928 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 100
Software Software Software Name Purpose BUSTER refinement XDS data reduction XSCALE data scaling PHASER phasing