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Structure of the Crimean-Congo Haemorrhagic Fever Virus Nucleocapsid Protein
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 0.1 M BIS-TRIS PROPANE PH 6.5, 0.2 M NACL, 25% PEG 600
Crystal Properties Matthews coefficient Solvent content 2.4 48
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 150.38 α = 90 b = 72.06 β = 110.7 c = 101.23 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 2M TOROIDAL MIRROR 2011-10-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I04-1 Diamond I04-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 48.79 95.5 0.04 13.9 3.3 56441 3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.1 2.21 97.2 0.47 2.5 3.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT NONE 2.1 94.7 53584 2857 95.17 0.18639 0.18394 0.1844 0.23359 0.2346 RANDOM 38.219
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.02 0.61 -1.34 0.75
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.714 r_dihedral_angle_4_deg 16.353 r_dihedral_angle_3_deg 14.853 r_dihedral_angle_1_deg 4.753 r_scangle_it 2.194 r_angle_refined_deg 1.559 r_scbond_it 1.37 r_angle_other_deg 1.167 r_mcangle_it 0.924 r_mcbond_it 0.502
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.714 r_dihedral_angle_4_deg 16.353 r_dihedral_angle_3_deg 14.853 r_dihedral_angle_1_deg 4.753 r_scangle_it 2.194 r_angle_refined_deg 1.559 r_scbond_it 1.37 r_angle_other_deg 1.167 r_mcangle_it 0.924 r_mcbond_it 0.502 r_symmetry_vdw_refined 0.252 r_nbd_refined 0.212 r_nbtor_refined 0.177 r_nbd_other 0.156 r_xyhbond_nbd_refined 0.14 r_symmetry_vdw_other 0.135 r_mcbond_other 0.114 r_chiral_restr 0.085 r_nbtor_other 0.084 r_xyhbond_nbd_other 0.032 r_bond_refined_d 0.022 r_gen_planes_refined 0.004 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7463 Nucleic Acid Atoms Solvent Atoms 313 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling autoSHARP phasing