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Crystal structure of anti-mcp-1 antibody cnto888
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 293 4.3 M SODIUM FORMATE CRYO VAPOR DIFFUSION, SITTING DROP, temperature 293K, pH 7.5
Crystal Properties Matthews coefficient Solvent content 3.17 61
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 121.54 α = 90 b = 121.54 β = 90 c = 84.23 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RIGAKU SATURN 944 MIRRORS 2006-05-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 HF 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.6 30 99.8 0.069 7.5 18826 18826 -3 39.9
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.6 2.67 98.4 0.455 7.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.6 15 17765 17765 965 94.8 0.19364 0.19364 0.19057 0.24912 0.2058 RANDOM 50.9
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.21 -1.21 2.42
RMS Deviations Key Refinement Restraint Deviation r_scbond_it 44.528 r_scangle_it 39.058 r_dihedral_angle_2_deg 37.638 r_dihedral_angle_3_deg 16.488 r_dihedral_angle_4_deg 11.648 r_dihedral_angle_1_deg 6.566 r_mcangle_it 5.318 r_mcbond_it 2.76 r_angle_refined_deg 1.304 r_chiral_restr 0.085
RMS Deviations Key Refinement Restraint Deviation r_scbond_it 44.528 r_scangle_it 39.058 r_dihedral_angle_2_deg 37.638 r_dihedral_angle_3_deg 16.488 r_dihedral_angle_4_deg 11.648 r_dihedral_angle_1_deg 6.566 r_mcangle_it 5.318 r_mcbond_it 2.76 r_angle_refined_deg 1.304 r_chiral_restr 0.085 r_bond_refined_d 0.009 r_gen_planes_refined
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3208 Nucleic Acid Atoms Solvent Atoms 130 Heterogen Atoms
Software Software Software Name Purpose CrystalClear data collection MOLREP phasing REFMAC refinement XDS data reduction XDS data scaling