X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.9958.87

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 215.163α = 90
b = 112.723β = 110.3
c = 171.393γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSPRING-8 BEAMLINE BL44XU0.9000SPring-8BL44XU

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.850100354390

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.837.59336219176341000.163380.162450.181RANDOM19.594
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.890.10.35-1.17
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.791
r_dihedral_angle_4_deg15.411
r_dihedral_angle_3_deg12.955
r_dihedral_angle_1_deg5.691
r_scangle_it2.141
r_scbond_it1.266
r_angle_refined_deg1.054
r_angle_other_deg0.825
r_mcangle_it0.801
r_mcbond_it0.414
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.791
r_dihedral_angle_4_deg15.411
r_dihedral_angle_3_deg12.955
r_dihedral_angle_1_deg5.691
r_scangle_it2.141
r_scbond_it1.266
r_angle_refined_deg1.054
r_angle_other_deg0.825
r_mcangle_it0.801
r_mcbond_it0.414
r_mcbond_other0.088
r_chiral_restr0.063
r_bond_refined_d0.007
r_gen_planes_refined0.005
r_bond_other_d0.004
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms22817
Nucleic Acid Atoms
Solvent Atoms2039
Heterogen Atoms162

Software

Software
Software NamePurpose
REFMACrefinement