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Synthesis of novel MT3 receptor ligands via unusual Knoevenagel condensation
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP VAPOR DIFFUSION, HANGING DROP
Crystal Properties Matthews coefficient Solvent content 2.38 48.29
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.879 α = 90 b = 82.764 β = 90 c = 106.353 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray IMAGE PLATE RIGAKU RAXIS IV++ M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU 1.54
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.948 25.688 36364 36186
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.948 25.688 36364 36186 1811 98.27 0.1696 0.1674 0.1779 0.2101 0.2199 RANDOM 30.973
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.31 -0.01 -2.3
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.301 r_dihedral_angle_4_deg 19.553 r_dihedral_angle_3_deg 15.037 r_dihedral_angle_1_deg 7.94 r_scangle_it 4.162 r_scbond_it 2.912 r_angle_refined_deg 2.006 r_mcangle_it 1.769 r_mcbond_it 1.097 r_chiral_restr 0.145
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.301 r_dihedral_angle_4_deg 19.553 r_dihedral_angle_3_deg 15.037 r_dihedral_angle_1_deg 7.94 r_scangle_it 4.162 r_scbond_it 2.912 r_angle_refined_deg 2.006 r_mcangle_it 1.769 r_mcbond_it 1.097 r_chiral_restr 0.145 r_bond_refined_d 0.024 r_gen_planes_refined 0.01
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3648 Nucleic Acid Atoms Solvent Atoms 210 Heterogen Atoms 154
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data collection