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Crystal structure of human PRS1 E43T mutant
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 4.1 295 pH 4.1, VAPOR DIFFUSION, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.38 48.33
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 169.498 α = 90 b = 169.498 β = 90 c = 61.871 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRF BEAMLINE BL17U 1.0 SSRF BL17U
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3 48.93 13109 13076
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3 48.93 12462 646 98.33 0.25545 0.25326 0.2659 0.29765 0.3031 RANDOM 41.139
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 12.53 12.53 -25.06
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.989 r_dihedral_angle_3_deg 17.71 r_dihedral_angle_4_deg 14.359 r_dihedral_angle_1_deg 5.655 r_scangle_it 2.138 r_angle_refined_deg 1.281 r_scbond_it 1.229 r_mcangle_it 0.962 r_rigid_bond_restr 0.735 r_mcbond_it 0.508
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.989 r_dihedral_angle_3_deg 17.71 r_dihedral_angle_4_deg 14.359 r_dihedral_angle_1_deg 5.655 r_scangle_it 2.138 r_angle_refined_deg 1.281 r_scbond_it 1.229 r_mcangle_it 0.962 r_rigid_bond_restr 0.735 r_mcbond_it 0.508 r_chiral_restr 0.083 r_bond_refined_d 0.011 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4694 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 25
Software Software Software Name Purpose HKL-2000 data collection MOLREP phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling