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Murine Norovirus RNA-dependent-RNA-polymerase in complex with Compound 6, a suramin derivative
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 MICROBATCH 8.4 293.15 1.6M (NH4)2SO4, 12% Glycerol, 100mM TrisHCL pH8.4, microbatch, temperature 293.15K
Crystal Properties Matthews coefficient Solvent content 3.09 60.16
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 109.22 α = 90 b = 162.42 β = 97.04 c = 122.96 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M 2013-04-04 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 0.97949 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 64.96 99.9 188102
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.42 99.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.3 61.09 178553 178553 9440 99.83 0.194 0.194 0.19085 0.25396 0.2563 RANDOM 45.367
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.11 0.68 0.82 1.17
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.188 r_dihedral_angle_4_deg 19.272 r_dihedral_angle_3_deg 16.515 r_dihedral_angle_1_deg 5.98 r_angle_other_deg 3.531 r_angle_refined_deg 1.333 r_chiral_restr 0.074 r_bond_refined_d 0.01 r_gen_planes_other 0.007 r_gen_planes_refined 0.006
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.188 r_dihedral_angle_4_deg 19.272 r_dihedral_angle_3_deg 16.515 r_dihedral_angle_1_deg 5.98 r_angle_other_deg 3.531 r_angle_refined_deg 1.333 r_chiral_restr 0.074 r_bond_refined_d 0.01 r_gen_planes_other 0.007 r_gen_planes_refined 0.006 r_bond_other_d
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 22787 Nucleic Acid Atoms Solvent Atoms 1714 Heterogen Atoms 286
Software Software Software Name Purpose EDNA data collection MOLREP phasing REFMAC refinement MOSFLM data reduction SCALA data scaling