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Crystal Structure of BACE with amino thiazine inhibitor LY2886721
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 277 PEG8000, sodium cacodylate, ammonium sulfate, pH 7.4
Crystal Properties Matthews coefficient Solvent content 2.59 52.47
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 86.432 α = 90 b = 89.773 β = 90 c = 130.663 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX225HE 2014-08-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 31-ID 0.979 APS 31-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.77 130 100 13.2 7.3 99757
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.77 73.99 98625 1040 99.95 0.17299 0.17263 0.173 0.20767 0.2074 RANDOM 19.322
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.66 1.37 -0.72
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.542 r_dihedral_angle_4_deg 18.525 r_dihedral_angle_3_deg 11.815 r_dihedral_angle_1_deg 6.541 r_long_range_B_refined 5.87 r_mcangle_it 2.206 r_scbond_it 1.859 r_angle_refined_deg 1.391 r_mcbond_it 1.316 r_chiral_restr 0.094
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.542 r_dihedral_angle_4_deg 18.525 r_dihedral_angle_3_deg 11.815 r_dihedral_angle_1_deg 6.541 r_long_range_B_refined 5.87 r_mcangle_it 2.206 r_scbond_it 1.859 r_angle_refined_deg 1.391 r_mcbond_it 1.316 r_chiral_restr 0.094 r_bond_refined_d 0.01 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6099 Nucleic Acid Atoms Solvent Atoms 860 Heterogen Atoms 66
Software Software Software Name Purpose REFMAC refinement SCALA data scaling REFMAC phasing