X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION8.327716-18% PEG 10 000, 0.1M imidazole pH 8.2 -8.4
Crystal Properties
Matthews coefficientSolvent content
2.652.5

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 66.817α = 90
b = 147.531β = 92.06
c = 87.297γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42008-12-08MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND BEAMLINE I020.9795DiamondI02

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.675.09970.0940.08416.65.65046250462
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.62.6880.62.081.973.7

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT2.675.0950430178796.980.22680.22480.267RANDOM95.396
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.71-2.014.54-2.67
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg40.943
r_dihedral_angle_3_deg19.959
r_dihedral_angle_4_deg19.758
r_dihedral_angle_1_deg10.05
r_mcangle_it3.943
r_angle_other_deg3.625
r_mcbond_it2.296
r_mcbond_other2.293
r_angle_refined_deg1.855
r_chiral_restr0.108
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg40.943
r_dihedral_angle_3_deg19.959
r_dihedral_angle_4_deg19.758
r_dihedral_angle_1_deg10.05
r_mcangle_it3.943
r_angle_other_deg3.625
r_mcbond_it2.296
r_mcbond_other2.293
r_angle_refined_deg1.855
r_chiral_restr0.108
r_bond_refined_d0.016
r_gen_planes_other0.012
r_gen_planes_refined0.009
r_bond_other_d
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms11632
Nucleic Acid Atoms
Solvent Atoms639
Heterogen Atoms

Software

Software
Software NamePurpose
PDB_EXTRACTdata extraction
REFMACrefinement
Aimlessdata scaling
PHASERphasing