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MAGE-A3 Reactive TCR in complex with Titin Epitope in HLA-A1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7 291 0.2M Ammonium Chloride, 0.1M MES, 20% PEG 4000
Crystal Properties Matthews coefficient Solvent content 2.5 50.72
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 173.81 α = 90 b = 47.48 β = 109.36 c = 119.53 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2013-01-30 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I02 0.97950 Diamond I02
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.13 81.82 98.1 0.093 0.057 0.996 11.3 3.5 36248 36248
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.13 2.19 97.7 0.868 0.501 0.524 2 3.8 3748
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.4 81.82 34441 1807 99.06 0.206 0.203 0.2621 0.2628 RANDOM 56.084
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.68 -0.55 -1.33 1.92
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.984 r_dihedral_angle_3_deg 19.994 r_dihedral_angle_4_deg 18.105 r_dihedral_angle_1_deg 8.217 r_mcangle_it 2.359 r_angle_refined_deg 1.7 r_mcbond_it 1.435 r_mcbond_other 1.435 r_angle_other_deg 0.894 r_chiral_restr 0.109
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.984 r_dihedral_angle_3_deg 19.994 r_dihedral_angle_4_deg 18.105 r_dihedral_angle_1_deg 8.217 r_mcangle_it 2.359 r_angle_refined_deg 1.7 r_mcbond_it 1.435 r_mcbond_other 1.435 r_angle_other_deg 0.894 r_chiral_restr 0.109 r_bond_refined_d 0.014 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6564 Nucleic Acid Atoms Solvent Atoms 10 Heterogen Atoms 61
Software Software Software Name Purpose Aimless data scaling PHASER phasing REFMAC refinement PDB_EXTRACT data extraction XDS data reduction