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Solid-state MAS NMR structure of Acinetobacter phage 205 (AP205) coat protein in assembled capsid particles
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D HhNH 500 mg/mL [U-100% 13C; U-100% 15N] AP205 coat protein, 15 % [U-2H] PEG, 5 mM HEPES, 50 mM sodium chloride H2O 0.055 M 7.5 AMBIENT atm 283 Bruker AVANCE III 1000 2 3D HhCH 500 mg/mL [U-100% 13C; U-100% 15N] AP205 coat protein, 15 % [U-2H] PEG, 5 mM HEPES, 50 mM sodium chloride H2O 0.055 M 7.5 AMBIENT atm 283 Bruker AVANCE III 1000 3 3D HCCH-TOCSY 500 mg/mL [U-100% 13C; U-100% 15N] AP205 coat protein, 15 % [U-2H] PEG, 5 mM HEPES, 50 mM sodium chloride H2O 0.055 M 7.5 AMBIENT atm 283 Bruker AVANCE III 1000 4 3D HCCH-TOCSY 500 mg/mL [U-100% 13C; U-100% 15N] AP205 coat protein, 15 % [U-2H] PEG, 5 mM HEPES, 50 mM sodium chloride H2O 0.055 M 7.5 AMBIENT atm 283 Bruker AVANCE III 1000 5 3D hNCAH 500 mg/mL [U-100% 13C; U-100% 15N] AP205 coat protein, 15 % [U-2H] PEG, 5 mM HEPES, 50 mM sodium chloride H2O 0.055 M 7.5 AMBIENT atm 283 Bruker AVANCE III 1000 6 3D hNcoCAH 500 mg/mL [U-100% 13C; U-100% 15N] AP205 coat protein, 15 % [U-2H] PEG, 5 mM HEPES, 50 mM sodium chloride H2O 0.055 M 7.5 AMBIENT atm 283 Bruker AVANCE III 1000 7 3D hCOCAH 500 mg/mL [U-100% 13C; U-100% 15N] AP205 coat protein, 15 % [U-2H] PEG, 5 mM HEPES, 50 mM sodium chloride H2O 0.055 M 7.5 AMBIENT atm 283 Bruker AVANCE III 1000 9 3D hCOnCAH 500 mg/mL [U-100% 13C; U-100% 15N] AP205 coat protein, 15 % [U-2H] PEG, 5 mM HEPES, 50 mM sodium chloride H2O 0.055 M 7.5 AMBIENT atm 283 Bruker AVANCE III 1000 8 3D hCANH 500 mg/mL [U-100% 13C; U-100% 15N] AP205 coat protein, 15 % [U-2H] PEG, 5 mM HEPES, 50 mM sodium chloride H2O 0.055 M 7.5 AMBIENT atm 283 Bruker AVANCE III 1000 10 3D hcoCAcoNH 500 mg/mL [U-100% 13C; U-100% 15N] AP205 coat protein, 15 % [U-2H] PEG, 5 mM HEPES, 50 mM sodium chloride H2O 0.055 M 7.5 AMBIENT atm 283 Bruker AVANCE III 1000
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 1000
NMR Refinement Method Details Software torsion angle dynamics Sparky
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment Sparky Goddard 6 chemical shift assignment CARA 1.9 Keller and Wuthrich 2 collection TopSpin 3.5 Bruker Biospin 3 peak picking Sparky Goddard 4 processing TopSpin 3.5 Bruker Biospin 5 structure calculation UNIO 2.6 Torsten Herrmann et al. 7 structure calculation CYANA 3.97 Guntert, Mumenthaler and Wuthrich