5MMC
Trypanosoma brucei Pex14 N-terminal domain
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 1 mM [U-99% 13C; U-99% 15N] Pex14 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE 500 |
2 | 3D HCCH-TOCSY | 1 mM [U-99% 13C; U-99% 15N] Pex14 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE 500 |
3 | 3D HNCA | 1 mM [U-99% 13C; U-99% 15N] Pex14 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE 500 |
4 | 3D HNCACB | 1 mM [U-99% 13C; U-99% 15N] Pex14 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE 500 |
9 | 3D CBCA(CO)NH | 1 mM [U-99% 13C; U-99% 15N] Pex14 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE 500 |
7 | 3D 1H-15N NOESY | 1 mM [U-99% 13C; U-99% 15N] Pex14 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE 900 |
6 | 3D 1H-13C NOESY | 1 mM [U-99% 13C; U-99% 15N] Pex14 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE 900 |
8 | 3D 1H-13C NOESY aromatic | 1 mM [U-99% 13C; U-99% 15N] Pex14 | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE 900 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 500 |
2 | Bruker | AVANCE | 900 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | CNS | Brunger A. T. et.al. | |
2 | collection | TopSpin | Bruker Biospin | |
3 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
4 | chemical shift assignment | Sparky | Goddard | |
5 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich |