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LECTIN FROM BAUHINIA FORFICATA IN COMPLEX WITH GLOBOTETRAOSE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 293 PROTEIN CONCENTRATION 5-8 MG/ML IN 0.05 M HEPES BUFFER (pH 7.5) AND 0.15 M NACL, PRECIPITANT: 28% (W/W) PEG6000, 0.5 M LITHIUM CHLORIDE, , 0.1 M TRIS (pH 8.5), DROPLETS RATIO: 1:1
Crystal Properties Matthews coefficient Solvent content 2.01 38.84
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 44.681 α = 90 b = 88.233 β = 90 c = 110.782 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX300-HS 2016-02-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-ID 1.0000 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.43 50 96.5 0.068 0.07 0.019 8.2 12.9 79081
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.43 1.45 56.3 0.471 0.52 0.213 0.862 4.7 2287
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.43 39.861 71808 3713 93.27 0.1067 0.1047 0.1034 0.1466 0.146 RANDOM 17.14
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.12 -1.12 1
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 58.626 r_dihedral_angle_2_deg 34.815 r_dihedral_angle_4_deg 18.1 r_sphericity_bonded 13.901 r_dihedral_angle_3_deg 12.452 r_dihedral_angle_1_deg 7.305 r_rigid_bond_restr 5.334 r_angle_other_deg 2.577 r_mcangle_it 2.178 r_mcbond_it 2.059
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 58.626 r_dihedral_angle_2_deg 34.815 r_dihedral_angle_4_deg 18.1 r_sphericity_bonded 13.901 r_dihedral_angle_3_deg 12.452 r_dihedral_angle_1_deg 7.305 r_rigid_bond_restr 5.334 r_angle_other_deg 2.577 r_mcangle_it 2.178 r_mcbond_it 2.059 r_angle_refined_deg 1.986 r_mcbond_other 1.737 r_chiral_restr 0.142 r_bond_refined_d 0.02 r_gen_planes_refined 0.011 r_bond_other_d 0.003 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3622 Nucleic Acid Atoms Solvent Atoms 406 Heterogen Atoms 126
Software Software Software Name Purpose HKL-3000 data collection HKL-3000 data scaling REFMAC refinement PDB_EXTRACT data extraction HKL-3000 data reduction PHASER phasing