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MEK1 IN COMPLEX WITH BI 847325
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3EQC
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 293 18 % PEG 4000, 100 mM Tris, 300 mM NaCl
Crystal Properties Matthews coefficient Solvent content 2.61 52.85
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 78.76 α = 90 b = 78.76 β = 90 c = 223.412 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M 2011-10-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA 1.000 SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 68.21 97.2 0.16 0.12 5.5 2.6 20634
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.7 2.89 97.4 0.7 1.1 2.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3EQC 2.7 68.21 19120 1357 99.24 0.2468 0.2426 0.2706 0.3077 0.3029 RANDOM 19.644
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 5.01 2.5 5.01 -7.51
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.537 r_dihedral_angle_4_deg 13.889 r_dihedral_angle_3_deg 13.626 r_dihedral_angle_1_deg 5.407 r_scangle_it 3.863 r_scbond_it 2.458 r_mcangle_it 1.773 r_angle_other_deg 1.252 r_mcbond_it 0.972 r_angle_refined_deg 0.901
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.537 r_dihedral_angle_4_deg 13.889 r_dihedral_angle_3_deg 13.626 r_dihedral_angle_1_deg 5.407 r_scangle_it 3.863 r_scbond_it 2.458 r_mcangle_it 1.773 r_angle_other_deg 1.252 r_mcbond_it 0.972 r_angle_refined_deg 0.901 r_mcbond_other 0.124 r_chiral_restr 0.051 r_bond_refined_d 0.006 r_gen_planes_refined 0.003 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2308 Nucleic Acid Atoms Solvent Atoms 17 Heterogen Atoms 69
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction XDS data reduction XSCALE data scaling