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Estrogen Receptor Alpha Y537S covalently bound to antagonist H3B-5942.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 293 6-12% PEG 3350, 50-150 mM MgCL2, 0.1 M imidazole pH 7.1
Crystal Properties Matthews coefficient Solvent content 2.44 49.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 58.735 α = 90 b = 58.735 β = 90 c = 274.814 γ = 120
Symmetry Space Group P 65 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 120 CCD RAYONIX MX225-HS 2014-10-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-F 0.9787 APS 21-ID-F
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.75 50 100 0.085 0.088 0.023 8.6 15.4 29591
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.75 1.81 100 0.888 0.917 0.229 0.904 15.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.89 44.47 22475 1216 99.97 0.20239 0.19954 0.2074 0.25694 0.2573 RANDOM 37.582
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.787 r_dihedral_angle_4_deg 17.422 r_dihedral_angle_3_deg 16.132 r_long_range_B_refined 9.522 r_long_range_B_other 9.521 r_dihedral_angle_1_deg 7.026 r_scangle_other 6.729 r_mcangle_it 5.019 r_mcangle_other 5.018 r_scbond_it 4.838
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.787 r_dihedral_angle_4_deg 17.422 r_dihedral_angle_3_deg 16.132 r_long_range_B_refined 9.522 r_long_range_B_other 9.521 r_dihedral_angle_1_deg 7.026 r_scangle_other 6.729 r_mcangle_it 5.019 r_mcangle_other 5.018 r_scbond_it 4.838 r_scbond_other 4.837 r_mcbond_it 3.586 r_mcbond_other 3.582 r_angle_refined_deg 2.043 r_angle_other_deg 1.263 r_chiral_restr 0.145 r_bond_refined_d 0.019 r_gen_planes_refined 0.011 r_bond_other_d 0.005 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1956 Nucleic Acid Atoms Solvent Atoms 150 Heterogen Atoms 53
Software Software Software Name Purpose REFMAC refinement SCALEPACK data scaling PDB_EXTRACT data extraction HKL-3000 data reduction MOLREP phasing