SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY1.37 mM [U-15N]-Phe-Leu-Val Ghrelin 1-18, 2.05 uM [U-2H] Ghrelin receptor90% H2O/10% D2O100 KCl mM6.51 atm280Bruker AVANCE III 700
62D 1H-1H TOCSY1.37 mM [U-15N]-Phe-Leu-Val Ghrelin 1-18, 2.05 uM [U-2H] Ghrelin receptor90% H2O/10% D2O100 KCl mM6.51 atm280Bruker AVANCE III 700
22D 1H-1H NOESY1.37 mM [U-15N]-Phe-Leu-Val Ghrelin 1-18, 2.05 uM [U-2H] Ghrelin receptor, 2.05 uM JMV532790% H2O/10% D2O100 KCl mM6.51 atm280Bruker AVANCE III 700
52D 1H-1H TOCSY1.37 mM [U-15N]-Phe-Leu-Val Ghrelin 1-18, 2.05 uM [U-2H] Ghrelin receptor, 2.05 uM JMV532790% H2O/10% D2O100 KCl mM6.51 atm280Bruker AVANCE III 700
33D 1H-1H-15N NOESY-HMQC1.15 mM [U-15N]-Phe-Leu-Val-Ser-Gln-Glu Ghrelin 1-18, 1.72 uM [U-2H] Ghrelin receptor90% H2O/10% D2O100 KCl mM6.51 atm280Bruker AVANCE III 700
72D 1H-15N SOFAST-HMQC1.15 mM [U-15N]-Phe-Leu-Val-Ser-Gln-Glu Ghrelin 1-18, 1.72 uM [U-2H] Ghrelin receptor90% H2O/10% D2O100 KCl mM6.51 atm280Bruker AVANCE III 700
43D 1H-1H-15N NOESY-HMQC1.15 mM [U-15N]-Phe-Leu-Val-Ser-Gln-Glu Ghrelin 1-18, 1.72 uM [U-2H] Ghrelin receptor, 1.72 uM JMV532790% H2O/10% D2O100 KCl mM6.51 atm280Bruker AVANCE III 700
82D 1H-15N SOFAST-HMQC1.15 mM [U-15N]-Phe-Leu-Val-Ser-Gln-Glu Ghrelin 1-18, 1.72 uM [U-2H] Ghrelin receptor, 1.72 uM JMV532790% H2O/10% D2O100 KCl mM6.51 atm280Bruker AVANCE III 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III700
NMR Refinement
MethodDetailsSoftware
molecular dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number1000
Conformers Submitted Total Number10
Representative Model1 (fewest violations)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpin3.5Bruker Biospin
4processingTopSpin3.2Bruker Biospin
2peak pickingSparky1.2T. D. Goddard and D. G. Kneller, SPARKY 3, University of California, San Francisco
3structure calculationAmber14Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman