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Human nucleosome core particle with gammaH2A.X variant
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6 291.15 potassium chloride, manganese chloride, potassium cacodylate
Crystal Properties Matthews coefficient Solvent content 2.49 50.64
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 102.85 α = 90 b = 109.42 β = 90 c = 181.47 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 98.15 PIXEL DECTRIS PILATUS 2M 2018-09-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06DA 1 SLS X06DA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.75 93.7 100 0.193 0.202 0.059 0.999 8.4 11.9 54043 95.485
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Rpim I (All) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.75 2.9 100 0.779 11.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.75 93.7 52860 1104 99.98 0.2192 0.218 0.2766 0.2512 RANDOM 87.721
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 5.69 -5.76 0.07
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.729 r_dihedral_angle_3_deg 19.204 r_dihedral_angle_4_deg 18.446 r_dihedral_angle_1_deg 5.742 r_angle_other_deg 1.341 r_angle_refined_deg 1.202 r_chiral_restr 0.063 r_bond_refined_d 0.004 r_bond_other_d 0.004 r_gen_planes_refined 0.004
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.729 r_dihedral_angle_3_deg 19.204 r_dihedral_angle_4_deg 18.446 r_dihedral_angle_1_deg 5.742 r_angle_other_deg 1.341 r_angle_refined_deg 1.202 r_chiral_restr 0.063 r_bond_refined_d 0.004 r_bond_other_d 0.004 r_gen_planes_refined 0.004 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6148 Nucleic Acid Atoms 6029 Solvent Atoms 30 Heterogen Atoms 27
Software Software Software Name Purpose REFMAC refinement iMOSFLM data reduction SCALA data scaling PHASER phasing