X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP293PEG400
Crystal Properties
Matthews coefficientSolvent content
4.6173.29

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 309.977α = 90
b = 75.708β = 100.05
c = 83.047γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS3 R 300K2016-11-11MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSSRF BEAMLINE BL18U10.97915SSRFBL18U1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
13.25501000.14684.730159
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
13.253.3799.90.71834.5

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT3.2547.5727487145595.280.24950.248890.26155RANDOM89.735
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-3.74-3.421.283.46
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg27.687
r_dihedral_angle_1_deg15.711
r_dihedral_angle_3_deg13.364
r_dihedral_angle_4_deg10.112
r_long_range_B_refined3.422
r_long_range_B_other3.421
r_mcangle_it2.138
r_mcangle_other2.137
r_scangle_other1.431
r_angle_refined_deg1.197
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg27.687
r_dihedral_angle_1_deg15.711
r_dihedral_angle_3_deg13.364
r_dihedral_angle_4_deg10.112
r_long_range_B_refined3.422
r_long_range_B_other3.421
r_mcangle_it2.138
r_mcangle_other2.137
r_scangle_other1.431
r_angle_refined_deg1.197
r_mcbond_it1.119
r_mcbond_other1.119
r_angle_other_deg1.05
r_scbond_it0.696
r_scbond_other0.696
r_chiral_restr0.028
r_bond_refined_d0.002
r_gen_planes_refined0.002
r_bond_other_d0.001
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms7271
Nucleic Acid Atoms
Solvent Atoms2
Heterogen Atoms130

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling
PHASERphasing