6TIR
NOE based model of hVDAC-1 bound to beta-NADH in detergent micelles
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D 15N resolved NOESY | 0.5 mM [U-99%-2H, 15N; 99%-1Hdelta-IL; 99%-1Hgamma-V] human VDAC-1, 45 mM beta-NADH, 150 mM [U-99% 2H] LDAO | 90% H2O/10% D2O | 25 mM | 6.5 | 1 atm | 303.15 | Bruker AVANCE 900 |
2 | 3D 13C resolved NOESY | 0.5 mM [U-99%-2H, 15N; 99%-1H,13C-delta-IL; 99%-1H,13Cgamma-V] human VDAC-1, 45 mM beta-NADH, 150 mM [U-99% 2H] LDAO | 90% H2O/10% D2O | 25 mM | 6.5 | 1 atm | 303.15 | Bruker AVANCE 900 |
3 | 3D HNCA | 0.5 mM U-99%-2H,15N,13C human VDAC-1, 150 mM [U-99% 2H] LDAO | 90% H2O/10% D2O | 25 mM | 6.5 | 1 atm | 303.15 | Bruker AVANCE 900 |
4 | 3D HNCO | 0.5 mM U-99%-2H,15N,13C human VDAC-1, 150 mM [U-99% 2H] LDAO | 90% H2O/10% D2O | 25 mM | 6.5 | 1 atm | 303.15 | Bruker AVANCE 900 |
5 | 3D HNCACB | 0.5 mM U-99%-2H,15N,13C human VDAC-1, 150 mM [U-99% 2H] LDAO | 90% H2O/10% D2O | 25 mM | 6.5 | 1 atm | 303.15 | Bruker AVANCE 900 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 900 |
NMR Refinement | ||
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Method | Details | Software |
torsion angle dynamics | CYANA |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 500 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich | |
2 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
3 | chemical shift assignment | CARA | Keller and Wuthrich | |
4 | peak picking | XEASY | Bartels et al. |