7O2G

Unspecific peroxygenase from Hypoxylon sp. EC38 in complex with styrene


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP29320% PEG500 MME, 10% PEG20000, 0.1 M MES monohydrate pH 6.5
Crystal Properties
Matthews coefficientSolvent content
3.5164.95

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 71.9α = 90
b = 71.9β = 90
c = 154.555γ = 90
Symmetry
Space GroupP 41 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS EIGER X 16M2020-09-27MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X06SA0.9772SLSX06SA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)Rpim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.1154.5597.10.2210.230.0640.998812.723855
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)Rpim I (All)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.12.1699.85.7075.9311.6060.37913.5

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISTHROUGHOUT2.165.192306871697.110.2030.20240.2226RANDOM50.941
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
2.062.06-4.12
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.712
r_dihedral_angle_4_deg20.245
r_dihedral_angle_3_deg15.915
r_dihedral_angle_1_deg6.329
r_angle_refined_deg1.717
r_angle_other_deg1.353
r_chiral_restr0.073
r_bond_refined_d0.01
r_gen_planes_refined0.008
r_gen_planes_other0.005
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.712
r_dihedral_angle_4_deg20.245
r_dihedral_angle_3_deg15.915
r_dihedral_angle_1_deg6.329
r_angle_refined_deg1.717
r_angle_other_deg1.353
r_chiral_restr0.073
r_bond_refined_d0.01
r_gen_planes_refined0.008
r_gen_planes_other0.005
r_bond_other_d0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1757
Nucleic Acid Atoms
Solvent Atoms30
Heterogen Atoms84

Software

Software
Software NamePurpose
REFMACrefinement
Aimlessdata scaling
PDB_EXTRACTdata extraction
XDSdata reduction
PHASERphasing