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The NMR structure of the Zf-GRF domains from the mouse Endonuclease VIII-LIKE 3 (mNEIL3)
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 250 uM [U-13C; U-15N] NEIL3-GRF 95% H2O/5% D2O 50 mM 6.5 1 atm 298 Bruker AVANCE 850 2 2D 1H-13C HSQC 250 uM [U-13C; U-15N] NEIL3-GRF 95% H2O/5% D2O 50 mM 6.5 1 atm 298 Bruker AVANCE 850 3 3D HNCO 250 uM [U-13C; U-15N] NEIL3-GRF 95% H2O/5% D2O 50 mM 6.5 1 atm 298 Bruker AVANCE 850 4 3D HNCACB 250 uM [U-13C; U-15N] NEIL3-GRF 95% H2O/5% D2O 50 mM 6.5 1 atm 298 Bruker AVANCE 850 5 3D HBHA(CO)NH 250 uM [U-13C; U-15N] NEIL3-GRF 95% H2O/5% D2O 50 mM 6.5 1 atm 298 Bruker AVANCE 850 6 3D HN(CO)CA 250 uM [U-13C; U-15N] NEIL3-GRF 95% H2O/5% D2O 50 mM 6.5 1 atm 298 Bruker AVANCE 850 9 3D CBCA(CO)NH 250 uM [U-13C; U-15N] NEIL3-GRF 95% H2O/5% D2O 50 mM 6.5 1 atm 298 Bruker AVANCE 850 8 3D 1H-15N NOESY 250 uM [U-13C; U-15N] NEIL3-GRF 95% H2O/5% D2O 50 mM 6.5 1 atm 298 Bruker AVANCE 850 7 3D 1H-13C NOESY 250 uM [U-13C; U-15N] NEIL3-GRF 95% H2O/5% D2O 50 mM 6.5 1 atm 298 Bruker AVANCE 850 11 3D HCCH-TOCSY 250 uM [U-13C; U-15N] NEIL3-GRF 95% H2O/5% D2O 50 mM 6.5 1 atm 298 Bruker AVANCE 850 10 3D H(CCO)NH 250 uM [U-13C; U-15N] NEIL3-GRF 95% H2O/5% D2O 50 mM 6.5 1 atm 298 Bruker AVANCE 850
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 850
NMR Refinement Method Details Software simulated annealing CYANA
NMR Ensemble Information Conformer Selection Criteria all calculated structures submitted Conformers Calculated Total Number 100 Conformers Submitted Total Number 35 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 data analysis TopSpin Bruker Biospin 2 data analysis NMRFAM-SPARKY Lee W, Tonelli M, Markley JL 3 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 4 structure calculation YASARA YASARA