X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP29340% PEG 300 0.1M pH=8.6 CHES/NaOH

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 92.497α = 90
b = 98.658β = 90
c = 139.192γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315r2015-03-31MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID23-10.97242ESRFID23-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Rrim I (All)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.8848.4999.50.09213.46.7103373
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Rrim I (All)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.881.951.526

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISTHROUGHOUT1.8848.4998164513699.280.16830.16640.2068RANDOM44.138
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.580.87-0.3
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.549
r_dihedral_angle_4_deg21.142
r_dihedral_angle_3_deg13.847
r_dihedral_angle_1_deg7.063
r_angle_refined_deg1.333
r_angle_other_deg0.479
r_chiral_restr0.068
r_bond_refined_d0.009
r_bond_other_d0.001
r_gen_planes_refined0.001
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.549
r_dihedral_angle_4_deg21.142
r_dihedral_angle_3_deg13.847
r_dihedral_angle_1_deg7.063
r_angle_refined_deg1.333
r_angle_other_deg0.479
r_chiral_restr0.068
r_bond_refined_d0.009
r_bond_other_d0.001
r_gen_planes_refined0.001
r_gen_planes_other
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms8879
Nucleic Acid Atoms
Solvent Atoms570
Heterogen Atoms404

Software

Software
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction
XDSdata reduction
Aimlessdata scaling
REFMACphasing