7ACS
The SARS-CoV-2 nucleocapsid phosphoprotein N-terminal domain in complex with 7mer dsRNA
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 100 uM [U-13C; U-15N] N-NTD, 100 uM RNA (5'-R(P*CP*AP*CP*UP*GP*AP*C)-3'), 100 uM RNA (5'-R(P*GP*UP*CP*AP*GP*UP*G)-3'), 20 mM sodium phosphate, 50 mM sodium chloride | 95% H2O/5% D2O | 70 mM | 5.5 | 1 atm | 298 | Bruker AVANCE III HD 850 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE III HD | 850 |
NMR Refinement | ||
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Method | Details | Software |
molecular dynamics | HADDOCK |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 30 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure calculation | HADDOCK | Bonvin |