SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1.0 mM [U-13C; U-15N] acp5a-holo, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O100 mM61 atm298Bruker AVANCE III 600
23D HNCO1.0 mM [U-13C; U-15N] acp5a-holo, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O100 mM61 atm298Bruker AVANCE III 600
33D H(CCO)NH1.0 mM [U-13C; U-15N] acp5a-holo, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O100 mM61 atm298Bruker AVANCE III 600
43D C(CO)NH1.0 mM [U-13C; U-15N] acp5a-holo, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O100 mM61 atm298Bruker AVANCE III 600
53D HCCH-TOCSY1.0 mM [U-13C; U-15N] acp5a-holo, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O100 mM61 atm298Bruker AVANCE III 600
63D CCH-TOCSY1.0 mM [U-13C; U-15N] acp5a-holo, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O100 mM61 atm298Bruker AVANCE III 600
72D (HB)CB(CGCD)HD1.0 mM [U-13C; U-15N] acp5a-holo, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O100 mM61 atm298Bruker AVANCE III 600
82D (HB)CB(CGCDCE)HE1.0 mM [U-13C; U-15N] acp5a-holo, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O100 mM61 atm298Bruker AVANCE III 600
93D 1H-13C NOESY aliphatic1.0 mM [U-13C; U-15N] acp5a-holo, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O100 mM61 atm298Bruker AVANCE III 600
123D 1H-15N NOESY1.0 mM [U-13C; U-15N] acp5a-holo, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O100 mM61 atm298Bruker AVANCE III 600
113D 1H-13C NOESY aromatic1.0 mM [U-13C; U-15N] acp5a-holo, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O100 mM61 atm298Bruker AVANCE III 600
102D 1H-15N1.0 mM [U-13C; U-15N] acp5a-holo, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O100 mM61 atm298Bruker AVANCE III 600
132D TOCSY H(C12-N14)1.0 mM [U-13C; U-15N] acp5a-holo, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O100 mM61 atm298Bruker AVANCE III 600
142D NOESY H(C12-N14)1.0 mM [U-13C; U-15N] acp5a-holo, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O100 mM61 atm298Bruker AVANCE III 600
152D NOESY H-H(C12-N14)1.0 mM [U-13C; U-15N] acp5a-holo, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O100 mM61 atm298Bruker AVANCE III 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
NMR Refinement
MethodDetailsSoftware
molecular dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number50
Conformers Submitted Total Number20
Representative Model1 (fewest violations)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentNMRFAM-SPARKY1.470Bioinformatics. 2015 Apr 15; 31(8):1325-7. Epub 2014 Dec 12 NMRFAM-SPARKY: enhanced software for biomolecular NMR spectroscopy. Lee W, Tonelli M, Markley JL
2structure calculationCYANAGuntert, Mumenthaler and Wuthrich
3chemical shift assignmentNMRFAM-SPARKYLee et al. 2015
4refinementAmberCase, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
5collectionTopSpinBruker Biospin
6peak pickingNMRFAM-SPARKY1.470Bioinformatics. 2015 Apr 15; 31(8):1325-7. Epub 2014 Dec 12 NMRFAM-SPARKY: enhanced software for biomolecular NMR spectroscopy. Lee W, Tonelli M, Markley JL