SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1.0 mM [U-100% 13C; U-100% 15N] virginiamycin ACP6, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O0.1 M6.51 atm298Bruker AVANCE III 600
112D 1H-13C HSQC1.0 mM [U-100% 13C; U-100% 15N] virginiamycin ACP6, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O0.1 M6.51 atm298Bruker AVANCE III 600
162D 1H-1H(C12,N14) NOESY1.0 mM [U-100% 13C; U-100% 15N] virginiamycin ACP6, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O0.1 M6.51 atm298Bruker AVANCE III 600
172D 1H(C12,N14)-1H(C12,N14) NOESY1.0 mM [U-100% 13C; U-100% 15N] virginiamycin ACP6, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O0.1 M6.51 atm298Bruker AVANCE III 600
103D HNCACB1.0 mM [U-100% 13C; U-100% 15N] virginiamycin ACP6, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O0.1 M6.51 atm298Bruker AVANCE III 600
93D HNCO1.0 mM [U-100% 13C; U-100% 15N] virginiamycin ACP6, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O0.1 M6.51 atm298Bruker AVANCE III 600
83D HCCH-TOCSY1.0 mM [U-100% 13C; U-100% 15N] virginiamycin ACP6, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O0.1 M6.51 atm298Bruker AVANCE III 600
73D CCH-TOCSY1.0 mM [U-100% 13C; U-100% 15N] virginiamycin ACP6, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O0.1 M6.51 atm298Bruker AVANCE III 600
63D 1H-13C NOESY1.0 mM [U-100% 13C; U-100% 15N] virginiamycin ACP6, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O0.1 M6.51 atm298Bruker AVANCE III 600
53D 1H-15N NOESY1.0 mM [U-100% 13C; U-100% 15N] virginiamycin ACP6, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O0.1 M6.51 atm298Bruker AVANCE III 600
153D 1H-13C NOESY aromatic1.0 mM [U-100% 13C; U-100% 15N] virginiamycin ACP6, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O0.1 M6.51 atm298Bruker AVANCE III 600
43D HNCA1.0 mM [U-100% 13C; U-100% 15N] virginiamycin ACP6, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O0.1 M6.51 atm298Bruker AVANCE III 600
33D HNHA1.0 mM [U-100% 13C; U-100% 15N] virginiamycin ACP6, 100 mM sodium phosphate, 0.5 mM TCEP90% H2O/10% D2O0.1 M6.51 atm298Bruker AVANCE III 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
NMR Refinement
MethodDetailsSoftware
molecular dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number50
Conformers Submitted Total Number20
Representative Model1 (fewest violations)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementAmberCase, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
2structure calculationCYANAGuntert, Mumenthaler and Wuthrich
3chemical shift assignmentNMRFAM-SPARKYLee W, Tonelli M, Markley JL
4peak pickingNMRFAM-SPARKYLee W, Tonelli M, Markley JL